{"name":"brainrender-napari","display_name":"brainrender","visibility":"public","icon":"","categories":[],"schema_version":"0.2.1","on_activate":null,"on_deactivate":null,"contributions":{"commands":[{"id":"brainrender-napari.make_brainrender_viewer_widget","title":"Make Brainrender Napari Viewer","python_name":"brainrender_napari.brainrender_viewer_widget:BrainrenderViewerWidget","short_title":null,"category":null,"icon":null,"enablement":null},{"id":"brainrender-napari.make_brainrender_manager_widget","title":"Make Brainrender Napari Manager","python_name":"brainrender_napari.brainrender_manager_widget:BrainrenderManagerWidget","short_title":null,"category":null,"icon":null,"enablement":null}],"readers":null,"writers":null,"widgets":[{"command":"brainrender-napari.make_brainrender_viewer_widget","display_name":"Brainrender","autogenerate":false},{"command":"brainrender-napari.make_brainrender_manager_widget","display_name":"Manage atlas versions","autogenerate":false}],"sample_data":null,"themes":null,"menus":{},"submenus":null,"keybindings":null,"configuration":[]},"package_metadata":{"metadata_version":"2.4","name":"brainrender-napari","version":"0.1.4","dynamic":["license-file"],"platform":null,"supported_platform":null,"summary":"A napari plugin to render BrainGlobe atlases and associated data as layers.","description":"# brainrender-napari\n\n[![License BSD-3](https://img.shields.io/pypi/l/brainrender-napari.svg?color=green)](https://github.com/brainglobe/brainrender-napari/raw/main/LICENSE)\n[![PyPI](https://img.shields.io/pypi/v/brainrender-napari.svg?color=green)](https://pypi.org/project/brainrender-napari)\n[![Python Version](https://img.shields.io/pypi/pyversions/brainrender-napari.svg?color=green)](https://python.org)\n[![tests](https://github.com/brainglobe/brainrender-napari/workflows/tests/badge.svg)](https://github.com/brainglobe/brainrender-napari/actions)\n[![codecov](https://codecov.io/gh/brainglobe/brainrender-napari/branch/main/graph/badge.svg)](https://codecov.io/gh/brainglobe/brainrender-napari)\n\nVisualisation and management of BrainGlobe atlases in napari.\n\n----------------------------------\n\nA napari plugin to visualise and manage BrainGlobe atlases. `brainrender-napari` aims to port the functionality of [`brainrender`](https://github.com/brainglobe/brainrender) to [`napari`](https://napari.org/stable/).\n![add-region-brainrender-napari](https://github.com/brainglobe/brainrender-napari/assets/10500965/24fd3752-0ba7-4f47-aabf-5de22ff0f69b)\n\n## Usage\n\nCheck out the [\"Visualising an atlas in napari\"](https://brainglobe.info/tutorials/visualise-atlas-napari.html) tutorial in the BrainGlobe documentation.\n\n## Installation\n\nWe strongly recommend to use a virtual environment manager (like `conda` or `venv`). The installation instructions below will not specify the Qt backend for napari, and you will therefore need to install that separately. Please see [the `napari` installation instructions](https://napari.org/stable/tutorials/fundamentals/installation.html) for further advice on this.\n\nYou can install `brainrender-napari` via [pip]:\n\n    pip install brainrender-napari\n\n\n\nTo install latest development version :\n\n    pip install git+https://github.com/brainglobe/brainrender-napari.git\n\n## Seeking help or contributing\nWe are always happy to help users of our tools, and welcome any contributions. If you would like to get in contact with us for any reason, please see the [contact page of our website](https://brainglobe.info/contact.html).\n\n## License\n\nDistributed under the terms of the [BSD-3] license,\n\"brainrender-napari\" is free and open source software\n\n\n## Acknowledgements\n\nThis [@napari] plugin was generated with [Cookiecutter] using [@napari]'s [cookiecutter-napari-plugin] template and the [Neuroinformatics Unit's template](https://github.com/neuroinformatics-unit/python-cookiecutter).\n\n[Cookiecutter]: https://github.com/audreyr/cookiecutter\n[@napari]: https://github.com/napari\n[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin\n[BSD-3]: http://opensource.org/licenses/BSD-3-Clause\n[file an issue]: https://github.com/brainglobe/brainrender-napari/issues\n[tox]: https://tox.readthedocs.io/en/latest/\n[pip]: https://pypi.org/project/pip/\n[PyPI]: https://pypi.org/\n","description_content_type":"text/markdown","keywords":null,"home_page":null,"download_url":null,"author":null,"author_email":"Alessandro Felder <a.felder@ucl.ac.uk>","maintainer":null,"maintainer_email":null,"license":"BSD-3-Clause","classifier":["Development Status :: 2 - Pre-Alpha","Framework :: napari","Intended Audience :: Developers","Programming Language :: Python","Programming Language :: Python :: 3","Programming Language :: Python :: 3.11","Programming Language :: Python :: 3.12","Programming Language :: Python :: 3.13","Operating System :: OS Independent","License :: OSI Approved :: BSD License","Topic :: Scientific/Engineering :: Image Processing"],"requires_dist":["brainglobe-atlasapi>=2.2.0","brainglobe-utils>=0.4.3","meshio","napari>=0.6.1","numpy","qtpy","pytest; extra == \"dev\"","pytest-cov; extra == \"dev\"","pytest-mock; extra == \"dev\"","pytest-qt; extra == \"dev\"","coverage; extra == \"dev\"","tox; extra == \"dev\"","black; extra == \"dev\"","mypy; extra == \"dev\"","pre-commit; extra == \"dev\"","ruff; extra == \"dev\"","setuptools_scm; extra == \"dev\"","pyqt5; extra == \"dev\""],"requires_python":">=3.11.0","requires_external":null,"project_url":["Homepage, https://github.com/brainglobe/brainrender-napari","Bug Tracker, https://github.com/brainglobe/brainrender-napari/issues","Documentation, https://brainglobe.github.io/brainrender-napari","Source Code, https://github.com/brainglobe/brainrender-napari","User Support, https://github.com/brainglobe/brainrender-napari/issues"],"provides_extra":["dev"],"provides_dist":null,"obsoletes_dist":null},"npe1_shim":false}